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MUSHEUM

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Using museum specimens to understand mushroom population genomics.

Museum collections and other repositories contain a vast amount of specimens associated with metadata detailing the location, habitat and ecological observations of the specimen at the moment of collection. Since these specimens a... ver más

31/01/2026

Innovasjon Norge

227K€

Presupuesto del proyecto: 227K€

Líder del proyecto

Innovasjon Norge No se ha especificado una descripción o un objeto social para esta compañía.

Fecha límite participación Sin fecha límite de participación.

Financiación concedida El organismo HORIZON EUROPE notifico la concesión del proyecto el día 2023-04-24

HORIZON-MSCA-2022-PF-01-01: MSCA Postdoctoral Fellowships 2022 ExpectedOutcome:

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No hay información privada compartida para este proyecto. Habla con el coordinador.

1 Participantes

Innovasjon Norge

226.75K€ | Lider

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Duración del proyecto: 33 meses Fecha Inicio: 2023-04-24
Fecha Fin: 2026-01-31

Líder del proyecto

Innovasjon Norge No se ha especificado una descripción o un objeto social para esta compañía.

Presupuesto del proyecto 227K€

Fecha límite de participación Sin fecha límite de participación.

Descripción del proyecto Museum collections and other repositories contain a vast amount of specimens associated with metadata detailing the location, habitat and ecological observations of the specimen at the moment of collection. Since these specimens are biological tissues, DNA sequencing techniques can be used to study them. However, their application to fungi is still very limited. One of such applications is population genomics, a field where fungal study is also severely lagging behind that of plants and animals. The combination of sequences from museum specimens and fresh material will allow us to study populations of two mushroom-forming fungi, Trichaptum abietinum and Phelopillus nigrolimitatus. T. abietinum is an abundant species that is emerging as a model for population studies, with abundant information in Scandinavia. Museum samples will allow us to detect potential changes in selective forces that have affected Norwegian populations, mainly associated with landscape changes over the XXth century. P. nigrolimitatus is a Scandinavian Nearly Threatened species whose populations have been dwindling in association to land use changes. Museum samples will allow us to compare past and current genetic diversity of Norwegian populations, which will help inform conservation efforts. The project will generate SNP chips, which will help future population and conservation studies by providing a reliable and cost-efficient analytical tool. MUSHEUM will combine population genomic data with specimen metadata and ecological information to study selective pressures in the two species. Finally, MUSHEUM will make use of the combined genome skimming data generated for the design of SNP probes to generate de novo genome assemblies of the two species. This advances will allow to repurpose data from population studies for the generation of reference assemblies.

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